Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLEALKRVGTDFVLKTKDLFTPSESQVYVKDLRKVMIYKDGRKCRYPKNYDQVVESGKVIENKDMHGNSVLDK--DRNPT---YRLLYGNKNKDGWPIFELTKIMEIGDKSYFTIKFLVDKGKVSKGKCDNNDYHSFYKPF--GFLKIDLEKYLPVFEAQKTKKSTCSFEFTNSSVPTKKTKNKKSNEVKEIVDEKERNGELLYTSDYKKLSTSFFEIRDQSNNLELGKS---IISVPI---VFAAGLAKICAKLLTYIPMELGEYLIGKQSLIAKFFGYFFLFTPAVAVKNSVNMLATLLKLPICAFVANKEEYGDAYWTMWKYQLKECWQEAKNDYSVIKDGKRSELKKKDYPKREVAGTWKELDAK-------RSIIEEELEGRLSKGDE-NMTDSGKQEKDLEQDTTQPRTLIQRKIDYVSKLNEERDQDKCVSQIHN |
| 4QA5 Chain:A ((14-377)) | -LVPVYIYSPEYVSMCDSLAKIPKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDHPDSIEYGLGYDCPATEG--IFDYAA--AIGGATITAAQCLID-GMCKVAINWSGGWHHAKKDEASGFCYLN-DAVLGILRLRRKFERILYVDLDL----------HHGDGVEDTFSFTSK----VMTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFN--------------------PKAVVLQLGADTIA---GDPMCSFNMTPVGIGKCLKYILQWQL----------ATLILGGG-------GFNLANTARCWTYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHVV----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4QA5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 105231 for 3062 contacts (34.4/contact) +
2D Compatibility (PS) -35776 + (NN) -6501 + (LL) 5632
1D Compatibility (HY) -18400 + (ID) 3150
Total energy: 47036.0 ( 15.36 by residue)
QMean score : 0.167
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