Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQNSQLNYPITIELDDIKDTKLKLIKIVARLINKRYRTQKKAAIALKIDQPKVSQINKSKIEGFSLEYLLNLLVALDQDINMKIKHNSQHNIQ
3F6W Chain:A ((11-79))
-------------------RYQALLDLLLEARSAAGITQKELAARLGRPQSFVSKTENAER-RLDVIEFMDFCRGIGTDPYALLSKLEAMTP-
General information:
TITO was launched using:
RESULT:
Template:
3F6W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20602 for 449 contacts (-45.9/contact) +
2D Compatibility (PS) -7607 + (NN) -7010 + (LL) 1316
1D Compatibility (HY) -800 + (ID) 500
Total energy: -35203.0 ( -78.40 by residue)
QMean score : 0.642
(partial model without unconserved sides chains):
PDB file :
Tito_3F6W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F6W-query.scw
PDB file :
Tito_Scwrl_3F6W.pdb
: