Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MISKEDLLELMKIRHSRRSYGQSKLAHQEEINMLIETAWLSPSRYGDEPWRQVICNRQSNQDAWEKLLSCPTEPNQKWAKDTQILIISLSTKNFHDH-----------TK-----------------------IVNFWGSHDTGIANYTFMLQSYIYEFNAHQMSRFDRNKIVKNSIYQMILI
3GE6 Chain:A ((5-175))
-QTATDFMEIVKGRRSIRNYDTNVKISKEEMTQILEEATLAPSSVNMQPWRFLVIDSE---EGKATLAPLAK-FNQVQVETSSAVIAVFGDMKAIDQLENIYDTAVEKGLMPQEVRDRQVPAIQGMYENVPASALKDSILIDSGLVSMQLMLVARAHGYDTNPIGGYEKDQIAEAFGMEKDRY
General information:
TITO was launched using:
RESULT:
Template:
3GE6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36152 for 913 contacts (-39.6/contact) +
2D Compatibility (PS) -14905 + (NN) -8950 + (LL) 324
1D Compatibility (HY) -4400 + (ID) 1350
Total energy: -65433.0 ( -71.67 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_3GE6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GE6-query.scw
PDB file :
Tito_Scwrl_3GE6.pdb
: