Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSDDITSVSDQNFKSEVADYKGFVLVDFWAEWCRPCKNLMPRVEQLAKDKKGKIKICKFNIDGGAEVLSKYGIQSIPTLIIFQDGKEIARKIGTINDLSSWVDDEIS
1T8E Chain:B ((2-95))
--DKIIHLTDDSFDTDVLKADGAILVDFWAEWCGPCKMIAPILDEIADEYQGKLTVAKLNIDQNPGTAPKYGIRGIPTLLLFKNGEVAATKVGALSKGQLKEFLDAN
General information:
TITO was launched using:
RESULT:
Template:
1T8E.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68326 for 659 contacts (-103.7/contact) +
2D Compatibility (PS) -10127 + (NN) -5333 + (LL) 180
1D Compatibility (HY) -8400 + (ID) 1950
Total energy: -93956.0 ( -142.57 by residue)
QMean score : 0.753
(partial model without unconserved sides chains):
PDB file :
Tito_1T8E.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T8E-query.scw
PDB file :
Tito_Scwrl_1T8E.pdb
: