Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNDYLSLLNPEQQSAVTKVDGPVLILAGAGTGKTRTITSRIAHIIRNGYAHSDEILAVTFTNKAANEMVSRVLKLTG---TNILWLGTFHAIAAKILRRHADIVGLNPNFTIIGVDDQLQVIKNIINEVSPNNLSEKHSTIMNTIQKWKEKCLLPSEVEETQLFRPIYIIALKVYHQYQERLKFLNSVDFGDLLLYNIQLFNQKTEILSYYQGKFKYIMVDEYQDTNVIQYLWLKYLAKEHSNICCVGDDDQSIYSWRGAEVKNILKFSDDFKNAKIIKLECNYRSTSHILATASYVINHNKTRLEKKLWTTNIKGEKVNLIKLWDGKAEARFISEQILKL---NKYRFSDMAVLVRATFQTRVLEEYFIKYSIPYKIISGVKFYERQEVRDVIAYLRLVTNNNDDLAFERIVNRPKRSIGPTTLKKIYTVAQGNKTSFFEAAKILVNSNQVIEKIKLSLNDFFNKIKAWEEMISVKPLHKFVKTIANQSGYIEMLENEEV---TGLARIENVKELISSLKNFD---------NATTFLEHISLVMEV--DNMNNDDTVHVMTLHAAKGLEFPCVFLPGWEEGLFPHQRSFEDKSGKALEEERRLAYVGITRAKEKLIISCADRREINNQWQPMYASRFLKELPRENVEVIKSNIAYC |
| 1UAA Chain:A ((2-640)) | ------RLNPGQQQAVEFVTGPCLVLAGAGSGKTRVITNKIAHLIRGCGYQARHIAAVTFTNKAAREMKERVGQTLGRKEARGLMISTFHTLGLDIIKREYAALGMKANFSLFDDTDQLALLKELTEGLIE-DDKVLLQQLISTISNWKNDLKTPSQAAASA-IGERDRIFAHCYGLYDAHLKACNVLDFDDLILLPTLLLQANEEVRKRWQNKIRYLLVDEYQDTNTSQYELVKLLVGSRARFTVVGDDDQSIYSWRGARPQNLVLLSQDFPALKVIKLEQNYRSSGRILKAANILIANNPHVFEKRLFSELGYGAELKVLSANNEEHEAERVTGELIAHHFVNKTQYKDYAILYRGNHQSRVFEKFLMQNRIPYKISGGTSFFSRPEIKDLLAYLRVLTNPDDDSAFLRIVNTPKREIGPATLKKLGEWAMTRNKSMFTASFDMGLSQTLSGRGYEALTRFTHWLAEIQRL-AEREPIAAVRDLIHGMDYESWLYETSPSPKAAEMRMKNVNQLFSWMTEMLEGSELDEPMTLTQVVTRFTLRDMMER--EEELDQVQLMTLHASKGLEFPYVYMVGMEEGFLPHQSSI---DEDNIDEERRLAYVGITRAQKELTFTLCKERRQYGELVRPEPSRFLLELPQDDLIW-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UAA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -307327 for 5194 contacts (-59.2/contact) +
2D Compatibility (PS) -65032 + (NN) -18945 + (LL) 1184
1D Compatibility (HY) -46800 + (ID) 11600
Total energy: -448520.0 ( -86.35 by residue)
QMean score : 0.441
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