Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------------MHNQVIKHKKKDFSLAFKNKLALSNLFYRGL---YISLYAIKERAPEKHVDIIRVGIVISKKAGKATKRNKIKRRLRVL----------ARTNILDISNIGYYYIILT-HKNIMQASYKNLRKDITICLKKIK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4Y2H Chain:B ((1-352)) | SIAAEREAALERPRRTKRERDQLYYECYSDVSVHEEMIADRVRTDAYRLGILRNWAALRGKTVLDVGAGTGILSIFCAQAGA--RRVYAVEAS-AIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASAELFIAPISDQMLEWRLGFWSQVKQHYGVDMSCLEGFATRCLMGHSEIVVQGLSGEDVLARPQRFAQLELSRAGLEQELEAGVGGRFRCSCYGSAPMHGFAIWFQVTFPGGESEKPLVLSTSPFHPATHWKQALLYLNEPVQVEQDTDVSGEITLLPSRDNPRRLRVLLRYKVGDQEEKTKDFAMED |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Y2H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -33528 for 840 contacts (-39.9/contact) +
2D Compatibility (PS) -12045 + (NN) 1473 + (LL) 168
1D Compatibility (HY) -3200 + (ID) 900
Total energy: -48032.0 ( -57.18 by residue)
QMean score : 0.375
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