Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSFDERKILRTNFSNQPMISGGQSCSSDTCNKKSDLYKDTRSDCDSNNSSAQVNNSTQILLDDLPPQKIVKELDRFIIGQDDAKRAVAIALRNRWRRNKVPLPLRDEIIPKNILMIGHTGVGKTEIARRLAKLAGAPFIKVEATKFTEIGYVGRDVDSITRDLVDAAIVLVKEKARKALAKKALNLAEKIIVNSMV-------GENATEE----SKKTYRERLRNKEFEDGEVSINVRESKSMLPTFDIPGMPGRQVGVVNVTELMGKMFNGGKKTKTITVKVKEAREILINEESERLMDEDKIIKEAIDLVSNEGIVFLDEIDKIAARTEVKG-EVNREGVQRDLLPLLEGTTVSTKYGYVKTDYILFIASGAFHLSKPSDLLPELQGRLPIRVELKALTQEDLIKILKEPESSLLKQYIALMKTENVTLEFTDDGIETIAEIAFTVNREVENIGARRLHTIMEKLLDEISFIASEKNGEKFVIDSKYVKDKLESISKQLDLSRFIL |
| 1DO0 Chain:C ((2-442)) | --------------------------------------------------------------EMTPREIVSELDKHIIGQDNAKRSVAIALRNRWRRMQLNEELRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIKVEATKFTEVGYVGKEVDSIIRDLTDAAVKMVRVQAIEKNRYRAEELAEERILDVLIPPAKNNWGQTEQQQEPSAARQAFRKKLREGQLDDKEIEID-----------------------------------------ARKLKIKDAMKLLIEEEAAKLVNPEELKQDAIDAVEQHGIVFIDEIDKICKRGESSGPDVSREGVQRDLLPLVEGCTVSTKHGMVKTDHILFIASGAFQIAKPSDLIPELQGRLPIRVELQALTTSDFERILTEPNASITVQYKALMATEGVNIEFTDSGIKRIAEAAWQVNESTENIGARRLHTVLERLMEEISYDASDLSGQNITIDADYVSKHLDALVADEDLSRFIL |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1DO0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -205226 for 3073 contacts (-66.8/contact) +
2D Compatibility (PS) -42009 + (NN) -15706 + (LL) 3900
1D Compatibility (HY) -37200 + (ID) 11400
Total energy: -307641.0 ( -100.11 by residue)
QMean score : 0.584
|
|
|