Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQDDKKTTIEEEKGILGWIEYRLPIFSFLKHTASYQVPKNLNYAWNFGSLAGIALILQIITGIFLAMHYTPHVDHAFNSVERIMRDVNYGWLIRYTHAVGASLFFMVVYVHMMRGLYYGSYKRPREMVWFIGIFIFFAMMATAFMGYVLPWGQMSFWGATVITNLFSAVPLVGNKIVMWLWGGFSVDNPTLNRFFALHYLLPFVIIALAMLHIIALHRFGSGNPSGVEVK------SGKDTIPLYPYYIVKDCITFGLFFIVLFAFVFYAPNYLGHPSNYIEADSMVTPVHIVPEWYFLPFYAMLRS------------------IPDKLTGVLTMFGSILVWFLLPWLDKAKVKSGAYRPLFKKFFLVFAVNFAFLAWLGGQEVKEPYITLSRLSTLYYFAYFMVVLPLLSKYEKPEELPKTISDSVPEMK |
2QJK Chain:M ((8-425)) | ---------EPRTGIEKWLHSRLPIVALAYDTIMIPTPRNLNWMWIWGVVLAFCLVLQIVTGIVLAMHYTPHVDLAFASVEHIMRNVNGGFMLRYLHANGASLFFIAVYLHIFRGLYYGSYKAPREVTWIVGMLIYLAMMATAFMGYVLPWGQMSFWGATVITGLFGAIPGIGHSIQTWLLGGPAVDNATLNRFFSLHYLLPFVIAALVAIHIWAFHSTGNNNPTGVEVRRTSKAEAQKDTVPFWPYFIIKDVFALAVVLLVFFAIVGFMPNYLGHPDNYIEANPLRTPAHIVPEWYFLPFYAILRAFTADVWVVQIANFISFGIIDAKFFGVLAMFGAILVMALVPWLDTSPVRSGRYRPMFKIYFWLLAADFVILTWVGAQQTTFPYDWISLIASAYWFAYFLVILPILGAIEKPVAPPATIEEDFNA-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -325487 for 3014 contacts (-108.0/contact) +
2D Compatibility (PS) -40581 + (NN) -19929 + (LL) 664
1D Compatibility (HY) -60000 + (ID) 11450
Total energy: -456783.0 ( -151.55 by residue)
QMean score : 0.411
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