Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKFRAIQSKNKSILSREVHAAEFIPYSCYWNSTTLITKQDWLVKFIKLSGFAFETADDEDL--VIQNNIRNQMLRSISSPAFGLYFHTIRRKKNIFSDEFASQNFPNFFANHVNLKWREKHATRQSFINDLYITIIRRADTKGVEFLSHLLKKFGHVTSKHAWESDMRATYEDLEETTNRVMTNLRSYSPKILGVKETPNGLFCEIMEFLSRIVNCGFITNTLLPLKTEISRYLPVHRLFFGRKMIQVVTHNESKYAGIVSIKEYGNNTSAGMLDHFLQLPYEFIITQSFQFTNRQMAIAKMQIQQNRMIQSADKAISQIAEISHALDDAMSGRIVFGEHHLTILCIEKSPKSLDNALSFVESELSNCGVYPIREKVNLEPAFWAQVPGNFDYIVRKGTISSLNLAGFVSQHNYPTGNKFNNHWGDAVTVFDTTSGTPFFFNFHIRDVGHTMIIGPTGAGKTVLMNFLCAQAMKFSPRIFFFDKDRGAEIFLRALGGIYTLIEPRTKTNFNPLQLDDTPDNRTFLMEWIKSLISVYNDKFTSEDITRVNDAIEGNFKLRKEDRFLRNLVPFLGLAGSDTLAGAISMWHGNGSHAAIF-DNKEDLLDFSKARVFGFEMASLLKDPIALGPVLIYLFHRISISLDGTPSIIVLDEAWALIDNPVFAPKIKDWLKVLRKLNAFVVFATQSVEDASKSAISDTLVQQTATQIFLPNLKA-TSIYRNVFMLTEREYILIKHTDPSTRFFLVKQGINAVVARIDLKGLDDIVNVLSGRAESVILLHDILKEVGDDPKVWLPIFYQKVKNV |
| 3DU6 Chain:A ((1-596)) | ----------MVHYYRLSLKSRQKAPKIVNSKYNSILNIALKNFRLCKKHKTKKPVQILALLQEIIPKSYFGTTTNLKRFYKVVEKILTQSSFECIHLSVLHKCYDYDAIPWLQNVEPNLRPKLLLKHNLFLLDNIVKPIIAFYYKPIKTLNGHEIKFIRKEEYISFESKVFHKLKKMKYLVEVQDEVKPRGVLNIIPKQD-------------------------------NFRAIVSIFPDSARKPFFKLLTSKIYKVLEEKYKTSGSLYTCWSEFTQK------------TQGQIYGIKVDIRDAYGNVKIPVLCKLIQSIP-------------------------THLLDSEKKNFIVDHISN-------QFVAFRRKIYKWNHG------------------------LLQGDPL----------------SGCLCELYMAFMDRLYF--SNLDKDAFIHRTV-------DDYFFCSPHPHKVYDFELLIKGVYQVNPTKTRTNL------PTHRHPQDEIPYCGKIFNLTTRQVRTLYKLPPNYEIRHKFKLWNFNNQISDD------NPARFLQKAMDFPFICNSFTKFEFNTVFN------------DQRTVFANFYDAMICVAYKFDAAMMALRTSF------------LVNDFGFIWLVLSSTVRAYASRAFKKIVTYKGGKYRKVTFQCLKSIAWRAFLAVLKRRTEIYKGLIDRIKSREKLTMKFHDGEVDASYF---------------------------------------CKLPEKFRFVKINRKASI |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3DU6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -79460 for 4499 contacts (-17.7/contact) +
2D Compatibility (PS) -62188 + (NN) -11903 + (LL) 16172
1D Compatibility (HY) -17600 + (ID) 3200
Total energy: -158179.0 ( -35.16 by residue)
QMean score : 0.138
|
|
|