Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLNTLQLENYRNYDEVTLK--CHPDVNILIGENAQGKTNLLESIYTLALAKSHRTSNDKELIRFNAD--------YAKIEGELSYRHGTMPLTMFITKKGKQVKVNHLEQ-----------------SRLTQYIGHLNVVLFAP---EDLNIVKGSPQIRRRFIDMELGQISAVYLNDLAQYQRILKQKNNYLKQLQLGQKKDLTMLEVLNQQFAEYAMKVTDKRAHFIQELESLAKPIHAGITNDKEALSLNYLPSLKFDYAQNEAARLEEIMSILSDNMQREKERGISLFGPHRDDISFDVNGMDAQ----------------TYGSQGQQRTTALSIKLAEIELMNI-------EVGEYPILLLDDVLSELDDSRQTHLLSTIQHKVQ--TFVTTTSVDGIDHEIMNNAKLYRINQGEIIK------------ |
| 4UX3 Chain:A ((3-527)) | -YIKRVIIKGFKTYRNETIIDNFSPHQNVIIGSNGSGKSNFFAAIRFVLSDDYSNLKREERQGLIHQGSGGSVMSASVEIVIRRTVGLKKDDYQLNDRNVTKGDIVRMLETAGFSMNNPYNIVPQGKIVALTNAKDKERLQLLEDVVGAKSFEVKLKASLKKMEETEQKKIQINKEMGELNSKLSEMEQERKELEKYNELERNRKIYQFTLYDRELNEVINQMETSDQLLQRLNDMNTEISGLKNVNKRAFENFKKFNERRKDLAERASELDESKDSIQDLIVKLKQQKVNAVDSTFQKVSENFEAVFERLVPRGTAKLIIHSISVSFNSKQNEQLHVEQLSGGQKTVCAIALILAIQMVDPASFYLFDEIDAALDKQYRTAVATLLKELSKNAQFICTTFRTDMLQVADKFFRVKYENKISTVIEVNREEAIGFIR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UX3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28962 for 2284 contacts (-12.7/contact) +
2D Compatibility (PS) -38833 + (NN) -4966 + (LL) 208
1D Compatibility (HY) -3200 + (ID) 2400
Total energy: -78153.0 ( -34.22 by residue)
QMean score : 0.269
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