Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFKEERTMTNYTVDTLNLGKFITESGEVIDNLRLRYEHVGYH---GQPLVVVCHALTGNHLTY----GTDDYPGWWREIID-GGYIPIHDYQFLTFDVIGSPFGSSSP-------LN-DP--------HFPKKLTLRDIVRANERGIQALGYDKINI-LIGGSLGGMQAMELLYNQQFEVDKAIILAATSRTSSYSR-AFNEIARQAIHLGG------------KEGLSIARQLGFLTYRSSKSYDERFTPDE-----------VVAYQQH---QGNKFKEHFDLNCYLTLLDVLDSHNIDRGRTDVTHIFKNLETKVLTMGFIDDLLYPDDQVRALGERFK----YHRHFFVPDNVGHDGFLLNFSTWAPNLYHFLNLKHFKRK |
| 3I1I Chain:A ((4-374)) | -------MQIVKKEKFILKEYTFENGRTIP-VQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDNLCNVQ-VKNPHVITTGPKSINPKTGDEYAMDFPV-FTFLDVARMQCELIKDMGIARL-HAVMGPSAGGMIAQQWAVHYPHMVERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPYEKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNVEANVLMIPCKQDLLQPSRYNYKMVDLLQKQGKYAEVYEIESINGHMAGVFDIHLFEKKVYEFLNRKVS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3I1I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214440 for 2691 contacts (-79.7/contact) +
2D Compatibility (PS) -34260 + (NN) -16472 + (LL) 724
1D Compatibility (HY) -17200 + (ID) 3350
Total energy: -284998.0 ( -105.91 by residue)
QMean score : 0.474
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