Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MDRMYEQNQMPHNNEAEQSVLGSIIIDPELINTTQEVLL-PESFYRGAHQHIFRAMMHLNEDNKEIDVVTLMDQLSTEGTLNEAGGPQYLAELSTNVPTTRNVQYYTDIVSKHALKRRLIQTADSIANDGYNDELELDAILSDAERRILELSSSRESDGFKDIRDVLGQVYETAEELDQNSGQTPGIPTGYRDLDQMTAGFNRNDLIILAARPSVGKTAFALNIAQKVATHEDMYTVGIFSLEMGADQLATRMICSSGNVDSNRLRTGTMTEEDWSRFTIAVGKLSRTKIFIDDTPGIRINDLRSKCRRLKQEHGLDMIVIDYLQLIQGSGSRASDNRQQEVSEISRTLKALARELECPVIALSQLSRGVEQRQDKRPMMSDIRESGSIEQDADIVAFLYRDDYYNRGGDEDDDDDGGFEPQTNDENGEIEIIIAKQRNGPTGTVKLHFMKQYNKFTDIDYAHADMM |
2Q6T Chain:B ((7-440)) | ----------PHSLEAEQSVLGSILLDSDVMDEVEGLLPSPEAFYAEAHRKIYAAMQALRSQGRPVDLVTLSEELSRRGQLEEVGGTAYLLQLSEATPTAAYAEHYARIVAEKWTLRRLIQAAGEAMRLAYEEAGSLDEILDTAGKKILEVAL------ARPMRELVHETFEHIEAL---------VRTGFKELDQLIGTLGPGSLNIIAARPAMGKTAFALTIAQNAALKEGV-GVGIYSLEMPAAQLTLRMMCSEARIDMNRVRL---TDRDFSRLVDVASRLSEAPIYIDDTPDLTLMEVRARARRLVSQNQVGLIIIDYLQLMSGP------NRQQEIAAISRGLKALARELGIPIIALSQLSRAVEARPNKRPMLSDLRESGSIEQDADLVMFIYRDEYYN--------------PHS-EKAGIAEIIVGKQRNGPTGTVELQFHASHVRFNDL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Q6T.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193274 for 3127 contacts (-61.8/contact) +
2D Compatibility (PS) -44206 + (NN) -16673 + (LL) 552
1D Compatibility (HY) -38000 + (ID) 10000
Total energy: -301601.0 ( -96.45 by residue)
QMean score : 0.573
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