Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRHNIFYNRREFQMIDNFMQVLKLIKEKRTNNVVKKSDWDKGDLYKTLVHDKLPKQLKVHIKEDKYSVVGKVATGNYSKVPWISIYDENITKETKDGYYLVYLFHPEGEGIYLSLNQGWSKISDMFPRDKNAAKQRALTLSSELNKYITSNEFNTGRFYYAENKDSSYDLKNDYPSGYSHGSIRFKYYDLNEGFTEEDMLEDLKKFLELFNELASKVTKTSYDSLVNSIDEIQEDSEIEEIRTAQKDKTLKEVEAPKGIIPKYKKGVSKTTKNDSEIEKSNKENKLTGKVGEKLALNYFNELIDNKIDEDKKEQFRNILNDNPGSQHGHGYDLVAFDPTNTDKAVEKFIEIKTSTSSSIEEPFFMSLNEMFAMKEYKQKYLILRIFNVSGKEPQFYFIDPYANYSEFKDVDDLIDKVFNVEAIQYKVFGEK--- |
| 4RHJ Chain:A ((19-318)) | -----------SHMFSKFLMNVKGVTPR-------GSDWAN--------------------RLGPVALFG-YGAGMPRRAPLLDFFLQS---PRDCDHYAELTIHDKGP---------------IECPPETVMFMPVLNCGQMLDEA-AGTETPTSDEWYLGSLEASTELL---EKGYVPVSVG------GDGSATLSMVEAYKRLFP-----SDDIVIVHF-SARPSVSDPRS-----PLRVLLDKGLLKGVVSV---------GNRQVSSEDRKVRKLHK-------------MFYMD--------------MRDIRNDYP---VFISIDASVLDPAF---------------APAVDSPVAGGLS---------TRDLLHIMNGIRG--PKVVGIDVY-GYNPDLDVYRKDNVGLTAIALS-KIIKEGILK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 48992 for 2454 contacts (20.0/contact) +
2D Compatibility (PS) -29985 + (NN) -5865 + (LL) 9984
1D Compatibility (HY) -12000 + (ID) 2950
Total energy: 8176.0 ( 3.33 by residue)
QMean score : 0.126
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