Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNYFRYKQFNKDVITVAVGYYLRYT-------LSYRDISEILRERGVNVHHSTVYRWVQEYAPILYQIWKKKHKKAYYKWRIDETYIKIKGKWSYLYRAIDAEGHTLDIWLRKQRDNHSAYAFIKRLIKQFGKPQKVITDQAPSTKVAMAKVIKAFKLKPDCHCTSKYLNNLIEQDHRHIKVRKTRYQSINTAKNTLKGIECIYALYKKNRRSLQIYGFSPCHEISIMLAS |
2RN7 Chain:A ((4-56)) | -----NTRFSPEVRQRAVRMVLESQGEYDSQWATICSIAPKI-----GCTPETLRVWVRQHER------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RN7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -34939 for 272 contacts (-128.5/contact) +
2D Compatibility (PS) -4573 + (NN) 1502 + (LL) 14340
1D Compatibility (HY) -2000 + (ID) 450
Total energy: -26120.0 ( -96.03 by residue)
QMean score : 0.447
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