Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDNEKRVLREIYNHHNISRTQISKNLEINKATISSILNKLKYKSLVNEVGEGDSTKSGGRKPILLKVNHLYGYFISLDLTYSSVEVMYNYFDGNVIKHESYDLPDEKVSSILSIIKK-HIDIQEKLDTYNGLLGVSVSIHGVVDNEQH-VTYLP-FHETEGISIAKKIKEITNVPVVVENEANLSALYERNFNHNLSYNNLIALSIHKGIGAGLIINNQLYRGANGEAGEIGKTLVSKVSDNV-E-IFHKIEDIFSQEALLHNLSNQLNEKMTLSKLIQFYNEKNPVVVEEMEQFINKIAVLIHNLNTQFNPNAIYINCPLFNEM-PEILEAIKNQFKQYSR--NEIQIKLTSNVKFATLLGGTLAIIQKVLQINDIYLDIKA
3VOV Chain:A ((2-300))-------------------------------------------------------------------------KVVGLDLGGTKIAAGVFDG-KRLLSKVVVPTPKEGGERVAEALAEAAERAERE--AGVRGEAIGLGTPGPLDFRRGVIR---NIPGVQDFPIRRILEEATGRPVFLENDANAAALAEHHLGAAQGEESSLYLTVSTGIGGGVVLGGRVLRGERGQGGELGHLTLLPGGPACGCGLEGCLEALAAGRALERDATYAFQRPVDTRELFRLFQAGDPKAERLVLQAARYVGIGLASLVKAFDPGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAYLEVKDG---------


General information:
TITO was launched using:
RESULT:

Template: 3VOV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -206795 for 2601 contacts (-79.5/contact) +
2D Compatibility (PS) -30686 + (NN) -11388 + (LL) 4872
1D Compatibility (HY) -8000 + (ID) 2400
Total energy: -254397.0 ( -97.81 by residue)
QMean score : 0.442

(partial model without unconserved sides chains):
PDB file : Tito_3VOV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VOV-query.scw
PDB file : Tito_Scwrl_3VOV.pdb: