Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNKHYQIVIIGGGTAGVTVASRLLRKNQNL-KEKIAIIDPADHHYYQPLWTLVGAGVSSLKSSRKDMESVIP-EGANWIKQAVSSFQPENNSVILG--DN--TVVYYDFLVVAPGLQINWSSIKGLKENIGKNGVCSNYSPDYVNETWNQISNFKQGNAIFTHPN-------------TP-----IKCGGAPMKIMYLAEDYFRKHKIRSNANVIYATPKDALFD-VGKYNKELERIVEERNITVNYNYNLVEIDGDKKVATFEHIKAYDRKTISYDMLHVTPPMGPLDVVKEST--LSDSEGWVDVNPTTLQHKSYSNVFALGDASNVPTSKTGAAIRKQAPIVANNLLQVMNNQMLTHHYDGYTSCPIVTGY-NRLILAEFDYNKNTKETMPFNQAKERRSMYIFKKDLLPKMYWYGMLKGLI |
| 3H8L Chain:A ((2-357)) | ----TKVLVLGGRFGALTAAYTLK--RLVGSKADVKVINKSRFSYFRPALPHVAIGVRDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTKPDGSMAEEEYDYVIVGIGAHLATELVKGWDKY-----GYSVCEPEFATKLREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGPVFEMSLMLHGYFKKKGMLDKVHVTVFSPGEYLSDLSPNSRKAVASIYNQLGIKLVHNFKIKEIREH--EIVDEK-----GNTIPADITILLPPYTGNPALKNSTPDLVDDGGFIPTDL-NMVSIKYDNVYAVGDANSMTVPKLGYLAVMTGRIAAQHLANRLGVPTKVDKYYPTIVCVADNPYE-------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H8L.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -200368 for 2745 contacts (-73.0/contact) +
2D Compatibility (PS) -36011 + (NN) -12484 + (LL) 4516
1D Compatibility (HY) -14000 + (ID) 3550
Total energy: -261897.0 ( -95.41 by residue)
QMean score : 0.387
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