Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKENFWS-ELPRPFFILAPMEDVTDIVFRHVVSEAARPDVFFTEFTNTESF--C--HPEG----------------------------IHSVR--GRLTFSEDEHPMVAHIWGD-KPEQFRETSIQLAKMGFKGIDLNMGCPVANVAKKGKGSGLILRPDVAAEIIQATKAG-GLPVSVKTRLGYYEIDEWKDWLKHVFEQDIANLSIHLRT----------------------RKEMSKVDAHWE----LIEAIKNLRDEIAPNTLLTINGDIPDRKTGLELAEKYGIDGVMIGRGIFH-NPFAFEKEPREHTSKELLDLLRLHLSLFNKYEKDEIRQFKSLRRFFKIYVRGIRGASELRHQLMNTQSIAEARALLDEFEAQMDEDVKIEL |
| 1GTE Chain:A ((536-839)) | ---EMAGLKFINP-FGLASAAPTTSSSMIRRAFEAG-WGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYGPGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMG------LACGQDPELVRNICRWVRQAVQIPFFAKLTPNVTD---IVSIARAAKEGGADGVTATNTVSGLMGLKADGTPWPAVGAGKRTTYGGVSGTAIRPIALRAVTTIARAL----PGFPILATGGIDSAESGLQFLH-SGASVLQVCSAVQNQDFTVIQDYCTG-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GTE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122920 for 1967 contacts (-62.5/contact) +
2D Compatibility (PS) -24756 + (NN) -12732 + (LL) 8756
1D Compatibility (HY) 2000 + (ID) 1600
Total energy: -151252.0 ( -76.89 by residue)
QMean score : 0.419
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