Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQNHTAVNTAQAIILRDLVDALLFEDIAGIVSNSEITKENGQ-TLLIYERETQQ----IKIPVYFSALNMFRYESSQPI--TIEGRVSKQPLTAAEFWQTIANMNCDLSHEWEVARVEEGLTTAATQLAKQLSELDLASHPFVMSEQFASLKDRPFHPLAKEKRGLREADYQVYQAELNQSFPLMVAAVKKTHMIHGDTANIDELENLTVPIKEQAT--DMLNDQGLSIDDY----VLFPVHPWQYQHILPNVFATEISEKLVVLLPLKFGDYLSSSSMRSLIDIGAPYNHVKVPFAMQSLGALRLTP-TRYMKNGEQA---EQLLRQLIEKDEALAKYVMVCDETAWWSYMGQDNDIFKDQLGHLTVQLRKYPEVLAKNDTQQLVSMAALAANDRTLYQMICGKDNISKNDVMTLFEDIAQVFLKVTLSFMQYGALPELHGQNILLSFEDGRVQKCVLRDHDTVRIYKPWLTAHQLSLPKYVVREDTPNTL-INEDLETFFAYFQTLAVSVNLYAIIDAIQDLFGVSEHELMSLLKQILKNEVATISWVTTDQLAVRHILFDKQ---------TWPFKQILLPLLYQRDSGGGSMPSGLTTVPNPMVTYD-------------- |
| 4V2X Chain:A ((54-587)) | ------KTLDIQSYVRDMQPGWNLGNTFDAVGQDETAWGNPRVTRELIEQIADEGYKSIRIPVTWE--NRIGGAPDYPIDPQFLNRVDQVVQWALEEDLYVMINLHHDSWLW-IYEMEHNYNGVMVKYRSLWEQLSNHFKDYPTKLMFESVNEPKFSQNWGEIR----ENHHALLDDLNTVFFEIVRQSGGQNDIR----------PLVLPTMETATSQPLLNNLYQTIDKLDDPNLIATVHYYGFWPFSVNIAGYT-----------RFEENSKQEIIEAFDRVHHTFVARGIPVVLGEFGLLGFDKHTGVIQQGEKLKFFEFLIHHLNERD----ITHMLWDN-------GQ----------HFNRHTYEWYD-------QELFDMMRASWEGRS---------SVAESNFIYLKQGDRIADATVSLQ---------LHGNELTGLRANGQR----LTPGQDYELNGERLTVKAHVLSAIA----SSGTLGTNGMVTAEFNRGADWHFRVNTYRTP-VLQSTQGHVSN--FSIPASFNGNSLATMEAVYVDGGNAGPQDWTSFKEFGYAFSPSYDANEMKLTEAFFREVRDGEVRLTFHFWSGETVNYTIIKNGNQVTGIAAQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V2X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -113298 for 3960 contacts (-28.6/contact) +
2D Compatibility (PS) -52066 + (NN) -2495 + (LL) 7120
1D Compatibility (HY) -12800 + (ID) 4800
Total energy: -178339.0 ( -45.04 by residue)
QMean score : 0.139
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