Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------------------------------------MEKNVEKSFIKI-------GLYFQIAYIV--LMAITLCGFVICYGL----IFGLFYLLSGSRADYLIVTIVISAIISIFVIILSIVPVIVLASDLFKERISKGVILIVLAIIALVLCNFVSAILWFVSAI-SILGRK-KLVAAADTTTIQKSKGNANQASHKDTCKKELDSQDMMEHPEVKNPTTKNLEGFNEEIHKDEATTKVVSDNTEPPIESKGHVSKKD |
| 4F3V Chain:A ((1-275)) | GHMTDRLASLFESAVSMLPMSEARSLDLFTEITNYDESACDAWIGRIRCGDTDRVTLFRAWYSRRNFGQLSGSVQISMSTLNARIAIGGLYGDITYPVTSPLAITM-GFAACEAAQGNYADAMEALEAAPVAGSEHLVAWMKAVVYGAAERWTDVIDQVKSAGKWPDKFLAGAAGVAHGVAAANLALFTEAERRLTEANDSPAGEACARAIAWYLAMARRSQGN------------ESAAVALLEWLQTTHPEPKVAAALKDPSYRLKTTTAEQIASRADPWDPGSVV---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4F3V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -156765 for 1472 contacts (-106.5/contact) +
2D Compatibility (PS) -19548 + (NN) -2278 + (LL) 648
1D Compatibility (HY) 6800 + (ID) 1950
Total energy: -173093.0 ( -117.59 by residue)
QMean score : 0.085
|
|
|