Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTQTQPKFLTIYNTLYKEIQIGKYPSGHALPTEKELCARFDVSRMTLRQAIKLLAEDGIVESTRGKGHFVIPQTNAQHASSMDQFKHPLDQILLAR-V--SMSSINYRVDLESEYTNHLFANHP-SAVIAMERYYQKKDNHSKQADAFCFTFIPLNVIDTFKVNTQNE-DDMKTFVEQTIYSNAYQSDLKMSITKAPRFKNHSHVFDGDTHCWLIIETLYAQTPYPIMINKWYIPQEISELTLTRIRQSDY |
| 3F8M Chain:A ((14-243)) | -----LKHQVVRAELDRMLD-G-MRIGDPFPAEREIAEQFEVARETVRQALRELLIDGRVER-RGRTTVVARPKIRQ---PL--GMGSYTEAAKAQGLSAGRILVAWSDLTADEVLAGVLGVDVGAPVLQLERVLTTDGV----RVGLETTKLPAQRYPGLRE-TFDHEASLYAEIRS-RGIAFTRTVDTIDTALPDAREAALLGADARTPMFLLNRVSYDQDDVAIEQRRSLYRGDRMTFTAVMHAKN-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90865 for 1616 contacts (-56.2/contact) +
2D Compatibility (PS) -24791 + (NN) -12628 + (LL) 1264
1D Compatibility (HY) -2000 + (ID) 1900
Total energy: -130920.0 ( -81.01 by residue)
QMean score : 0.405
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