Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKFEKYIDHTLLKPESTRTQIDQIIDEAKAY--NFKSVCVNPTHVKYAAERLAD---SEVLVCTVIGFPLGASTTATKAFETEDAIQNGADEIDMVINIGALKDGR----FDDVQQDIEAVVKAAKGHTVKVIIET-VLLDHDEIVKASELTKAAGADFVKTSTGFAGGGATAEDVKLMKDT-----VGADVEVKASGGVRNLEDFNKMVEAGATRIGASAGVQIMQGLEADSDY
1JCJ Chain:B ((14-217))
----KLMDLTTLNDDDTDEKVIALCHQAKTPVGNTAAICIYPRFIPIARKTLKEQGTPEIRIATVTNFPHGNDDIDIALAETRAAIAYGADEVDVVFPYRALMAGNEQVGFDLVKA--CKEACAAANVLLKVIIETGELKDEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKTVGFLPAGGVRTAEDAQKYL-------------------------
General information:
TITO was launched using:
RESULT:
Template:
1JCJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62447 for 1551 contacts (-40.3/contact) +
2D Compatibility (PS) -21425 + (NN) -8138 + (LL) 2136
1D Compatibility (HY) -10000 + (ID) 3600
Total energy: -103474.0 ( -66.71 by residue)
QMean score : 0.571
(partial model without unconserved sides chains):
PDB file :
Tito_1JCJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JCJ-query.scw
PDB file :
Tito_Scwrl_1JCJ.pdb
: