Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIYKSLTVSAIVATVSLSALPQSLAITHESQPTKQQRTVLFDRSHGQTAGAADWVSDGAFSDYADSIQKQGYDVKAIDGHSNI-TEASLKSSKIFVIPEANIPFKESEQAAIVNYVKQGGNVVFISDHYNADRNLNRIDSSEAMNGYRRGAYEDMSKGMNAEEKSSTAMQGVKSSDWLSTNFGVRFRYNALGDLNTSNIVSSKESFG---ITEGVKSVSMHAGSTLAITNPEKAKGIVYTPEQLPAKSKWSHAVDQGIYNGGGKAEGPYVAISKVGKGKAAFIGDSSLVEDSSP-KYVREDNGEKKKTYDGFKEQDNGKLLNNITAWMSKDSDGKSLKASGLTLDTKTKLLDFERPERSTEPEKEPW----SQPPSGYKWYDPTTFKAGSYGSEKGADP--QPNTPDDHTPPNQNVKISFDIPQNVSVNEPFEVTIHLKGFEANQTLENLRVGIYKEGGRQIGQFSSKDNDYNPPGYSTLPTVKADENGNATIKINAKVLESMEGSKIRLKLGDKTLITTDFK |
| 4C2E Chain:A ((2-436)) | ---------ADSERDKAMDKIEKAYELISNEYVEKVDREKLLEGAIQGMLSTLND-----PYSVYMDKQTAKQFSDSLDSSFEGIGAEVGMEDGKIIIV----SPFKKS--PAEKAGLKPNDEIISING--------------ESMAGKD---LNHAVLKIRGKKGSSVSMKIQRPGTKKQLSFRIKRAEIPLETVFASEKKVQGHSVGYIAISTFSEHTTEDFAKALRELEKKEIEGLVIDVRGNP----------------GGYIQSVEEILKH-------------FVTKDQPYIQIAERNGDKKRYFSTLTHKKAYP-VNVITDKGS--AAASEILAGALKEAGHYDVVGDTSFGKGTVQQAVPMGDGSNIKLTLYKWLTPN----GNWIHKKGIEPTIAIKQPDYFSAGPLQLKEPLKVDMNNEDVKHAQVLLKGLSFDPGR-----EDGYFSKDMKKAVMAFQDQNKLNKTGI-------IDTRTAETLNQQIEKKKSDEKNDLQLQTALKSLF----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C2E.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 139479 for 3338 contacts (41.8/contact) +
2D Compatibility (PS) -43985 + (NN) -6759 + (LL) 4244
1D Compatibility (HY) -5200 + (ID) 3850
Total energy: 83929.0 ( 25.14 by residue)
QMean score : 0.023
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