Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MESTLELTKIKEVLQKNLK-ILIILPLLFLIISAIVTFFVLSPKYQANTQILVNQTKGDNPQFMAQEVQSNIQLVNTYKEIVK--------SPRILDEVSKDLNDKYSPSKLSSMLTITNQEN--TQLINIQVKSGHKQDSEKIANSFAKVTSKQIPKI-MSVDNVSILSKADGTAV---KVAPKTVVNLIGAFFLGLVVALIYIFFKVIFDKRIKDEEDVEKELGLPVLGSIQKFN |
4Y5J Chain:A ((15-241)) | ---ILPAEILNGLVDSNWKNRLAAVEQLLGEISG------FDAKQAGISQILIRTISGRKPGLKEMNFQVLKFKLDIIRSVAENYPLTTTTVDLVINEIIEKLADAKNGAAAADVLSAFAEATKLEYVVGKVLSFAFEQKSPKVQSEAFNWVNRSIIEFGFQLQPKTLIEDVRKGVQSTNPTVRASAIQMVGTMSMYMGKALMMFFDSEKPALKSQIQVEFDKNVGEKPPKPVRGV- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Y5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -44153 for 1632 contacts (-27.1/contact) +
2D Compatibility (PS) -21455 + (NN) -3596 + (LL) 1108
1D Compatibility (HY) -7600 + (ID) 1400
Total energy: -77096.0 ( -47.24 by residue)
QMean score : 0.292
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