Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQRIGAYLIDAFHRAGVDKIFGVPGDFNLAFLDDIISNPNVDWVGNTNELNASYAADGYARLNGLAALVTTFGVGELSAVNGIAGSYAERIPVIAITGAPTRAVEQAGKYVHHSLGEGTFDDYRKMFAHITVAQGYITP-ENATTEIPRLINTAIAERRPVHLHLP---IDVAISEIEIPTPFEVTATKDTDASTYIELLATKL---HQAKQPIIITGHEINSFHLHQELEDFVNQTQIPVAQLSLGKGAFNEENPYYMGIYDGKIAEDKIRDYVDNSDLILNIGAKLTDSATAGFSYQFNIDDVVMLNHHNIKIDDVTNDEISLPSLL-KQLSNISYTNSATFPAYHRPTSPDYTV--GTEPLTQQTYFKMMQNFLKPNDVIIADQGTSFFGAYDLALYKNNTF-IGQPLWGSIGYTLPATLGSQLA----DKDRRNLLLIGDGSLQLTVQAISTMIRQHIKPVLFVINNDGYTVERLIHGMYEPYNEIHMWDYKALPAVFGGKNVEIHDV----ESSKDLQD-TFNAINGHPDVMHFVEVKMSVEDAPKKLIDIAKAFSQQNK |
| 2VK1 Chain:B ((6-560)) | ----LGKYLFERLKQVNVNTVFGLPGAFNLSLLDKIYEVEGMRWAGNANELNAAYAADGYARIKGMSCIITTFGVGELSALNGIAGSYAEHVGVLHVVGVPSISAQAKQLLLHHTLGNGDFTVFHRMSANISETTAMITDIATAPAEIDRCIRTTYVTQRPVYLGLPANLVDLNVPAKLLQTPIDMS-LKPNDAESEKEVIDTILVLDKDAKNPVILADACCSRHDVKAETKKLIDLTQFPAFVTPMGKGSIDEQHPRYGGVYVGTLSKPEVKEAVESADLILSVGALLSDFNTGSFSYSYKTKNIVEFHSDHMKIRNATFPGVQMKFVLQKLLTAIADAAKGYKPVAVPARTPANAAVPASTPLKQEWMWNQLGNFLQEGDVVIAETGTSAFG-INQTTFPNNTYGISQVLWGSIGFTTGATLGAAFAAEEIDPKKRVILFIGDGSLQLTVQEISTMIRWGLKPYLFVLNNDGYTIEKLIHGPKAQYNEIQGWDHLSLLPTFGAKDYETHRVATTGEWDKLTQDKSFN----DNSKIRMIEVMLPVFDAPQNLVEQAKLTAATN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VK1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -277192 for 4836 contacts (-57.3/contact) +
2D Compatibility (PS) -57400 + (NN) -16773 + (LL) 940
1D Compatibility (HY) -45200 + (ID) 11100
Total energy: -406725.0 ( -84.10 by residue)
QMean score : 0.558
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