Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTGFSVYLGQPLDEAYIKRMIKQGYQM-IFTSVQIPEEDDETKYHYFTKLLNLLKYEQVTYLIDANPSILTPSFYEHLRQYDAQFMIRIDHSTSIEAIEAIMAQGLKCCLNASIISRELLTSLHQQLNDFTLLSFCHNYYPRPDTGLSVDLV-NKKNELIYQFNPKAQIY-GFIVGSGLR-GPLHKGLPTIEATRHSHPVVAAKLLQETGVSEVLVGDSLIEMRQAKQLIDFCKHRHFTLCIEEVFDTTVTYLFDMCHKVRPDNPENVIR-SETS-RQICPHSIQPQFTTQRRIGSVTVDNLNNGRYQGEMQIVRQTLSAHDNVNVVAQIIKEDLPLLSCIEPNDTFDFQKTRECKK |
| 3MML Chain:A ((2-290)) | --GTTLEVLRTGPLALVEDLGRPGLAHMGVTRSGAA---DRRSHTLANRLVANPGESATIEVTFGGFSARVC-------GGDVAIAVT------------------GADTDPAVNGIPFGTNSIHHVHDGQVISL-----GAPHSGLRSYLAVRGGIDVTPVLGSRSYDVMSAIGPSPLRPGDVLPVGEHTDEFPELDQAPVAAIAEDVVELQVVPGPRDDWFVDPDILVR----TNWLV----------------------TNRSDRVGMRLVGMPLEYRNPDRQLPSEGATRGAIQVPP------NGFPVILGPDHPVTGGYPVIGVVTEEDIDKLGQVRPGQTVRLHWAYPRR- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3MML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -75947 for 2388 contacts (-31.8/contact) +
2D Compatibility (PS) -29175 + (NN) 877 + (LL) 5276
1D Compatibility (HY) 1600 + (ID) 1750
Total energy: -99119.0 ( -41.51 by residue)
QMean score : 0.126
|
|
|