Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --------------MRENFKLRKMKVGLVSVAITMLYIMTNGQAEASETNQKVSTNQESKAVSQTEQNSK---------------------------ETKAAESSKN--FVNLDPIKPGAQKVTGTTLPN----------HIILLNIDGKSADSVEGGYGDFITANDKGEFEYPL----NNRKIVHNQE-------IEVSSSSPDLGDDEEDEEVEE--------SSTEKAGAEEESTDAKA----TYT---------TPRYEKAYEIPKEQ-----LKEKDGHHQ-----VFIEPITEGSGIIKGHTSVKGKVALSINNKFINFEERAKGGISKEDTKASSDGVWMPINEKGYF-----DFDFKKNPFDNLELK-----------KNDEISLTFAPDDED--EALKSLIFKTKVTSLEDIDKAETKYDHTKVEKVKVLKDVKEDIH--VDEIYGSLYHTEKGKGILDKQGTKEITGK---TKFANAVVKVYSDLG-----DAQLFPDIQVDENGKFSFDAEKAGFRLQNGETLNFAVVKPITGD---------LLHQGFVSKYIDVYES--PEEKKEREFEEKLENTPAYHKLHGDKIVGYDVQGNPSTWFYPLGEKKVERTTPKLEK |
| 2QYU Chain:A ((8-627)) | ATSSPSSPADWAKKLTDAVLRQKAGETLTAADRDFSNADFRNITFSKILPPSFMERDGDIIKGFNFSNSKFTYSDISHLHFDECRFTYSTLSDVVCSNTKFSNSDMNEVFLQYSITTQQQPSFIDTTLKNTLIRHKANLSGVILNEPDNSSPPSVSGG-GNFIRLGD-IWLQMPLLWTENAVDGFLNHEHNNGKSILMTIDSLPDKYSQEKVQAMEDLVKSLRGGRLTEACIRPVESSLVSVLAHPPYTQSALISEWLGPVQERFFAHQCQTYNDVPLPAPDTYYQQRILPVLLDSFDRNSAAMTTHSGLFNQVILHCMTG-VDCTDGTRQKAAALYEQYLAHPAVSPHIHNGLFGNYDGSPDWTTRAADNFLLLSSQDSDTAMMLSTDTLLTMLNPTPDTAWDNFYLLRAGENVSTAQISPVELFRHDFPVFLAAFNQQATQRRFGELIDIILSTEEHGELNQQFLAATNQKHSTVKLIDDASVSRLATIFDPLLPEGKLSPAHYQHILSAYHLTDATPQKQAETLFCLSTAFARYSSSAIFGTEHDSPPALRGYAEALMQKAWELSPAIFPSSEQFTEWSDRFHGLHGAFT--CTSVVADSMQRHARKYF----PSVLSSILPLAWA |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 164839 for 3240 contacts (50.9/contact) +
2D Compatibility (PS) -50905 + (NN) -13187 + (LL) 464
1D Compatibility (HY) -8400 + (ID) 4200
Total energy: 88611.0 ( 27.35 by residue)
QMean score : 0.124
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