Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-----MKFKKVLVATAMVGVLATGVVGYGNQADAKVYSQNGLVLHDDANFLEHELSYIDVLLDKNADQA-----------TKDNLRSYFADKGLHSIKDIINKAKQDGFDVSKYEHVK-------------
1HF0 Chain:A ((6-158))
LEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMSKLKPLLEKWLNDAERKKRTSIETNIRVALEKSFLENQKPTSEEITMIADQLNME---KEVIRVWFSNRRQKEKRI
General information:
TITO was launched using:
RESULT:
Template:
1HF0.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -16240 for 616 contacts (-26.4/contact) +
2D Compatibility (PS) -10369 + (NN) -2285 + (LL) 228
1D Compatibility (HY) 1200 + (ID) 850
Total energy: -28316.0 ( -45.97 by residue)
QMean score : 0.341
(partial model without unconserved sides chains):
PDB file :
Tito_1HF0.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HF0-query.scw
PDB file :
Tito_Scwrl_1HF0.pdb
: