Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKFSDYQLILDELKMTLSHVEADEFST----FASKILHAEHIFVAGKGRSGFVANSFAMRLNQ------LGKQAHVVG-ES---------------T---T-PAIKSNDVFVIISGSGSTEHLRLLADKAKSVGADIVLITTNKDSAIGN---LAGTNIVLPAGTKYDEQGSAQPLGSLFEQASQLFLDSVVMGLMTEMNVTEQTMQQNHANLE
1X92 Chain:A ((12-196))
-----LFQASIETKQQALEVLPP-YIEQASLVMVNALLNEGKILSCGNGGSAGDAQHFSSELLNRFERERPSLPAVALTTDSSTITSIANDYSYNEVFSKQIRALGQPGDVLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGGGMASLLLPEDVEIRVPSKIT--AR---IQ--EVHLLAIHCLCDLIDRQLFG-----------------
General information:
TITO was launched using:
RESULT:
Template:
1X92.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -83987 for 1234 contacts (-68.1/contact) +
2D Compatibility (PS) -16593 + (NN) -7083 + (LL) 1916
1D Compatibility (HY) -4000 + (ID) 1300
Total energy: -111047.0 ( -89.99 by residue)
QMean score : 0.623
(partial model without unconserved sides chains):
PDB file :
Tito_1X92.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1X92-query.scw
PDB file :
Tito_Scwrl_1X92.pdb
: