Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEKKGFNFNIIKNDPLDGHKGTNIGSISLDNIAPVFIDVANKEAFID-IGGMHARAKVEKGVKWITDKAAVEGDEAKEYWLCWVTT-ERNEQGP-YYAGLTACYLLVNKAIRRGY-KSMPEHVNMMDKSMKHHIIIDQIGDE-N-KAILKD-FLMNH-D-EGMWKLSSDALHQAFN |
| 2VQZ Chain:A ((3-165)) | ---SSSFSFGGFTFKRTSGSSIKREEEVLTGNLQTLKIRVHEGYEEFTMVGK-RATAILRKATRRLV-QLIVSGKDEQSIAEAIIVAMVFSQEDCMIKAVRGDLNFVNRANQRLNPMHQLLRHFQKDAKVLFQNWGIEHIDNVMGMVGVLPDMTPSTEMSMRGIRVSK--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2VQZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 4147 for 1062 contacts (3.9/contact) +
2D Compatibility (PS) -15630 + (NN) 5025 + (LL) 992
1D Compatibility (HY) -1600 + (ID) 1050
Total energy: -8116.0 ( -7.64 by residue)
QMean score : 0.029
|
|
|