Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEFREQVLNLLAEVAENDIV---KENPDVEIF-EEGIIDSFQTVGLLLEIQNKLDIEVSIMDFDRDEWATPNKIVEALEELR
2L4B Chain:A ((12-83))
-----QVMESVIGCLKLNDEQKQILSGTTNLAKDFN-LDSLDFVDLIMSLEERFSLEISDEDAQK--LETVDDICRYIAS--
General information:
TITO was launched using:
RESULT:
Template:
2L4B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33480 for 425 contacts (-78.8/contact) +
2D Compatibility (PS) -7023 + (NN) -3536 + (LL) 1156
1D Compatibility (HY) -4400 + (ID) 550
Total energy: -47833.0 ( -112.55 by residue)
QMean score : 0.589
(partial model without unconserved sides chains):
PDB file :
Tito_2L4B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2L4B-query.scw
PDB file :
Tito_Scwrl_2L4B.pdb
: