Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVVYGADVICASCVNAPTSKDIYDWLQPLLKRKYPNISFKYTYIDITKDNDNLTDHDLQFIERIEQDELFYPLITMNDEYVADGYIQTKQITRFIDQKLVNE
2HT9 Chain:A ((52-114))
-VIFSK-TSCSYCTMAK------KLFHDM--------NVNYKVVELDLLEYG-NQFQDALYKM--TGERTVPRIFVNGTFIG--------------------
General information:
TITO was launched using:
RESULT:
Template:
2HT9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34599 for 393 contacts (-88.0/contact) +
2D Compatibility (PS) -6550 + (NN) -414 + (LL) 3000
1D Compatibility (HY) -5200 + (ID) 450
Total energy: -44213.0 ( -112.50 by residue)
QMean score : 0.386
(partial model without unconserved sides chains):
PDB file :
Tito_2HT9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HT9-query.scw
PDB file :
Tito_Scwrl_2HT9.pdb
: