Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTTTPYDIIGKEALYD-MIDYFYTLVEKDERLNHLFP-GDFAETSRKQKQFLTQFLGGPNIYTEEHGHPMLRKRHMDFTITEFERDAWLENMQTAINRAAFPQGVGD-----YLFERLRLTANHMVNS
2QRW Chain:J ((3-126))
--KSFYDAVGGAKTFDAIVSRFYAQVAEDEVLRRVYPEDDLAGAEERLRMFLEQYWGGPRTYSEQRGHPRLRMRHAPFRISLIERDAFLRCMHTAV--ASIDSETLDDEHRRELLDYLEMAAHSLVNS
General information:
TITO was launched using:
RESULT:
Template:
2QRW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -45388 for 773 contacts (-58.7/contact) +
2D Compatibility (PS) -12915 + (NN) -9707 + (LL) 280
1D Compatibility (HY) -9200 + (ID) 2300
Total energy: -79230.0 ( -102.50 by residue)
QMean score : ?
(partial model without unconserved sides chains):
PDB file :
Tito_2QRW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QRW-query.scw
PDB file :
Tito_Scwrl_2QRW.pdb
: