Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKPIGVIDSGVGGLTVAKEIMR-QLPNETIYYLGDIGRCPYGPRPGEQVKQYTVEIARKLMEFDIKMLVIACNTATAVALEYLQKTLSIPVIGVIEPGARTAI--MTTRNQNVLVLGTEGTIKSEAYRTHIKRI--NPHVEVHGVACPGFVPLVEQMRYSDPTITSIVIHQTLKRWRN-SESDTVILGCTHYPLLYKPIYDYFGGKKTVISSGLETAREVSALLTFSNEHASYTEHPDHR----FFATGDPTHITNIIKEWLNLSVNVERISVND
3UHF Chain:B ((26-271))
---KIGVFDSGVGGLSVLKSLYEARLFDEIIYY-GDTARVPYGVKDKDTIIKFCLEALDFFEQFQIDMLIIACNTASAYALDALRAKAHFPVYGVIDAGVEATIKALHDKNKEILVIATKATIKSEEYQ---KRLLSQGYTNINALATGLFVPMVEEGIFEGDFLQSAMEYY----FKNITTPDALILACTHFPLLGRSLSKYFGDKTKLIHSG-------DAIVEFLKEREN-IDLKNHKAKLHFYASSDVESLKNTAKIWLNL-----------
General information:
TITO was launched using:
RESULT:
Template:
3UHF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -202553 for 2057 contacts (-98.5/contact) +
2D Compatibility (PS) -25069 + (NN) -6712 + (LL) 2716
1D Compatibility (HY) -23600 + (ID) 4700
Total energy: -259918.0 ( -126.36 by residue)
QMean score : 0.509
(partial model without unconserved sides chains):
PDB file :
Tito_3UHF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UHF-query.scw
PDB file :
Tito_Scwrl_3UHF.pdb
: