Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTVLFVGLGLIGGSLASNIKYHNPNTNIIAYDADTSQLDKAKSIGIINEKCLNYSEAIKKADVIIYATPVAITNK-YL---SELIDMPTKPGVIVSDTGSTKAMIQQHESNLLK-HNIHLVSGHPMAGSHKSGVLNAKKHLFENAYYILVYNEPRNEQAANTLKELLSPTLAKFIVTTAEEHDYVTSVVSHLPHIVASSLVHVSQKNGQEHHLVNKLAAGGFRDITRIASSNAQMWKDITLSNKTYILEMIRQLKSQFQDLERLIESNDSEKLLSFFAQAKSYRDALPAKQLGGLNTAYDLYVDIPDESGMISKVTYIMSLHNISISNLRILEVREDIYGALKISFKNPTDRERGMQALSDFDCYIQ |
| 3OBB Chain:A ((3-180)) | MKQIAFIGLGHMGAPMATNLLKA--GYLLNVFDLVQSAVDGLVAAGAS--AARSARDAVQGADVVISMLPASQHVEGLYLDDDGLLA-HIAP-TLVLECSTIAPTSARKIHAAARERGLAMLD-APVSGGTAG-A-------AAGTLTFMVGGD--A-EALEKARPLFEAMGRNIFHAGPDGAGQVAKVCNNQLL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OBB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108856 for 1549 contacts (-70.3/contact) +
2D Compatibility (PS) -18203 + (NN) -5822 + (LL) 12812
1D Compatibility (HY) -3600 + (ID) 1400
Total energy: -125069.0 ( -80.74 by residue)
QMean score : 0.462
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