Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKLQTTYPSNNYPIFVEHGAIDHISTYIDQFDQSFILIDEHVNQYFADKFDDILSYENVHKVIIPAGEKTKTFEQYQETLEYILSHH--VTRNTAIIAVGGGATGDFAGFVAATLLRGVHFIQVPTTILAH-DSSVGGKVGINSKQGKNLIGAFYRPTAVIYDLDFLKTLPFEQILSGYAEVYKHALLNGESTTQEIEQHFK------DREILQS---LNGMDKYIAKGIET----KLDIVVADEKEQGVRKFLNLGHTFGHAVE--YNHKIAHGHAVMIGIIYQFIVANIL-FNSNHDIQHYINYLTKLGYP-------LETITDIDFETIYQYMLS---DKKNDKQGVQMVLIKHFGDIVVQHIDQTTLQHACEQLKTYFK |
| 1NRX Chain:B ((78-372)) | ----------------------------------------------------------------PPGEVSKSRQTKADIEDWMLSQNPPCGRDTVVIALGGGVIGDLTGFVASTYMRGVRYVQVPTTLLAMVDSSIGGKTAIDTPLGKNLIGAIWQPTKIYIDLEFLETLPVREFINGMAEVIKTAAISSEEEFTALEENAETILKAVRREVTPGEHRFEGTEEILKARILASARHKAYVVSAD---GGLRNLLNWGHSIGHAIEAILTPQILHGECVAIGMVKEAELARHLGILKGVAVSRIVKCLAAYGLPTSLKDARIRKLTAGKHCSVDQLMFNMALD-----PKKKIVLLSAIG------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1NRX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -141928 for 1952 contacts (-72.7/contact) +
2D Compatibility (PS) -27496 + (NN) -4807 + (LL) 7328
1D Compatibility (HY) -24000 + (ID) 4850
Total energy: -195753.0 ( -100.28 by residue)
QMean score : 0.460
|
|
|