Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIGIPREIKNNENRVGLSPSGVHALVESGHTVLVETNAGSGSFFEDVDYKEAGAEIVAEQAKVWD-VDMVIKVKEPLESE-----YPYFKEGLVLFTYLHLANEEKLTQALIDRKVISIAYETVQLPDRSSPL--LSPMSEVAGRMSAQVGA-EFLQKLNGGMGILLGGVPGVPKGKVTIIGGGQAGTNAAKIALGLGADVTILDVNPKRLQQLDDLFGGRVHTIMSNPLNIELYVKQ----------SDLVIGAVLIPGAKAPRLVTEDMIKQMKNGSVIIDIAIDQGGIFETTDKITTHDDPTYIKHGVVHYAVANMPGAVPRTSTLALNNATLPYALMLANKGYREAFKSNQPLSLGLNTYKGHVTNKGVAEAFEMEYKSVEEALQL |
| 1NM5 Chain:B ((1-327)) | MKIAIPKERRPGEDRVAISPEVVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALSQADVVWKVQRPMTAEEGTDEVALIKEGAVLMCHLGALTNRPVVEALTKRKITAYAMELMPRISRANSMDILSSQSNLAGYRAVIDGAYEFARAFP----MMMTAAGTVPPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQVESL-GGKFITV-------EFRKKQAEAVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGG-----NCPLSEPGKIVVKHGVKIVGHTNVPSRV------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NM5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119689 for 2318 contacts (-51.6/contact) +
2D Compatibility (PS) -31469 + (NN) -10317 + (LL) 5152
1D Compatibility (HY) -17600 + (ID) 5400
Total energy: -179323.0 ( -77.36 by residue)
QMean score : 0.430
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