Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDVD----------------------HIAGRIEAG-K-GNDVLGILCHVDVVPAG--DGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILEDMNVDWKKRIHMIIGTDEESDWKCTDRYFKTEEMPTLGFAPDAEFPCIHGEKGITTFDLVQNKLTEDQDEPDYELITFKSGERYNMVPDHAEARVLVKENMTDVIQDFEYFLEQNHLQGDSTVDSGILVLTVEGKAVHGMDPSIGVNAGLYLLKFLASLNLDNNAQAFVAFSNRYLFNSDFGEKMGMKFHTDVMGDVTTNIGVITYDNENAGLFGINLRYPEGFEFEKAMDRFANEIQQYG----------FEVKLG-KVQPPHYVDKNDPFVQKLVTAYRNQTNDMTEPYTIGGGTYARNLD--KGVAFGAMFSDSEDLMHQKNEYITKKQLFNATSIYLEAIYSLCVEE |
| 3PFO Chain:A ((17-430)) | -LRAAVDRNFNDQVAFLQRMVQFRSVRG------------EEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPAGSMQVVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDARVHVQTVTEEESTGNGALSTLMRG------Y--RADA-CLIPE------------------------------------PTG-----------HTL--------------TRAQVGAVWFRLRVRGTPVHVAYSETGTSAILSAMHLIRAFEEYTKELN-AQAVR----DPWFGQV----KNPIKFNVGIIKGGDWASSTAAWCELDCRLGLLTGDTPQEAMRGIEKCLADAQATDSFLSENPAELVWSGFQADPAVCEPGGVAEDVLTAAHKAAFNAPLDARLSTAVNDTRYYSVDYGIPALCYGPY-GQGPHAFDERIDLESLRKTTLSIALFVAEWCGL- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -139586 for 3318 contacts (-42.1/contact) +
2D Compatibility (PS) -40444 + (NN) -14049 + (LL) 6348
1D Compatibility (HY) -4000 + (ID) 3300
Total energy: -195031.0 ( -58.78 by residue)
QMean score : 0.420
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