Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MNKHKKGSIFGIIGLVVIFAVVSFLFFSMISDQIF----FKHVKSDIKIEKLNVTLNDAAKKQINNYTSQQVSNK-KNDAWRDASATEIKSAMDSGTFIDNEKQKYQFLDLSKYQGIDKN--RIKRMLVDRPTLLKHTDDFLKAAKDK-------HVNEVYLISHALLETGAVKSE-------LANGVEIDGKKY--------YNFYGVGALDKDP-----IKTGAEYAK--KHGWDT--PEKAISGGA-------DFIHKHFLSSTDQNT----LYSMRWNPKNPGEHQYATDIKWAESNATIIADFYKNMKTEGKYFKYFVYK-------DDSKHLNK-------------------------- |
| 4OOU Chain:A ((20-383)) | SEFLKASGSNFYYGGQKVFLSGVNFAWRSYGSD--FGNGQYASNGPALKDWINKVKASGGNTARVWVHVEGQVSPAFDSHGFVTSTDSKKTLINDLSDLLDYANGQNVFLILVLFNGALQNNSNVQNLFWDESKLNSYINNALTPMVNALKSKPSLAAWEVLNEPEGTLQPGSDQNSCYDTSTLAAQGAGWGGKKFPMKQILKTINWISSAIHNADSKALVTVGSWSELTQTDSFGYRNHYKDSCLTGAGGKSNGIINFYQMHTYSHSGKWNQNAPFKVNRWAYNVNDKPLLIGEFASVCSQNEGIQNLYKYAYNNG-YNGALTWQFNSGGDCSDTYSNQMYGMQALKGQNDQSGGKGGMVSVNINH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OOU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 53393 for 2232 contacts (23.9/contact) +
2D Compatibility (PS) -29627 + (NN) -3836 + (LL) 388
1D Compatibility (HY) -5600 + (ID) 2600
Total energy: 12118.0 ( 5.43 by residue)
QMean score : 0.039
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