Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEVKTFYNGNTMPQIGLGTFRVENDENCMESVKYAIEQGYRSIDTAKVYGNEEQVGAGIRAGLESTGIAREDLFITSKLYFEDFGRENVAAAYEASLSRLGLKYLDLYLVHWPGTNEAVMVDTWKGMEDLYKNNKAKNIGVSNFEPEHLEALLAQVSIKPVINQVEYHPYLTQHKLKLYLAAQHIVMESWSPLMNAQILNDETIKDIAQELGKSPAQVVLRWNVQHGVVIIPKSVTPNRISENFQIFDFELSDEQMTRIDGLN-QDKRIGPDPKTFEG |
| 3WBY Chain:B ((16-279)) | --VISFHDGHTMPQIGLGVWETPPDETA-EVVKEAVKLGYRSVATARLYKNEEGVGKGLEDHPE--------IFLTTKLWNDEQGYDSTLRAYEESARLLRRPVLDLYLIHWPMPAQGQYVETWKALVELKKSGRVKSIGVSNFESEHLERIMDATGVVPVVNQIELHPDFQQRALREFHEKHNIRTESWRPLGKGRVLSDERIGKIAEKHSRTPAQVVIRWHLQNGLIVIPKSVNPKRLAENLDVFGFVLDADDMQAIEQMDRKDGRMGADPNT--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WBY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -99558 for 2225 contacts (-44.7/contact) +
2D Compatibility (PS) -28218 + (NN) -13481 + (LL) 912
1D Compatibility (HY) -21600 + (ID) 5850
Total energy: -167795.0 ( -75.41 by residue)
QMean score : 0.447
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