Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDTKQLKQDIIDYAYTIGIDSIGFTTADPFDELKQKLEAYHANGYASGFEESDIALRTEPKLSLPTARSIIAIAVGYPNKLKGAPKSVRGDRRGLFARASWGQDYHTIMRKRLDMLAAFIESKVPDVEIKSMVDTGVLSDRAVAERAGLGFVGRNGFVINPKLGTWTYLGEMLVSIPFEPDDPLLDSCGDCTICVDRCPTSALVGNG---QLNSQKCISFLTQTKGYMPDQYRYKIGNRLYGCD------TCQQVCPKNRGINTEQDDIILEPEILKPRLVPLLRMSNKEFKQTYGHLAGAWRGKKPIQRNAILALAHFNEVDAIPELKKVATTDERPMIRATAYWAIGQILGEEARDFINANYDQEDAEVQNEMIKGLDTRRE |
| 2FGO Chain:A ((5-59)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TDDCINCDVCEPECPNGAISQGEEIYVIDPNLCT-----------------------ECVGHYDEPQCQQVCPVDCIP-------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2FGO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -19005 for 251 contacts (-75.7/contact) +
2D Compatibility (PS) -4941 + (NN) -4107 + (LL) 21680
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -9923.0 ( -39.53 by residue)
QMean score : 0.447
|
|
|