Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
---MLKPIGNRVIIEKKEQEQTTKSGIVLTDSAKEKSNEGVIVAVGTGRLLNDGTRVTP-EVKEGDRVVFQQYAGTEVKRDNETYLVLNEEDILAVIE-
1P3H Chain:A ((1-99))
AKVNIKPLEDKILVQANEAETTTASGLVIPDTAKEKPQEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK
General information:
TITO was launched using:
RESULT:
Template:
1P3H.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -4779 for 585 contacts (-8.2/contact) +
2D Compatibility (PS) -10019 + (NN) 641 + (LL) 0
1D Compatibility (HY) -8800 + (ID) 2150
Total energy: -25107.0 ( -42.92 by residue)
QMean score : 0.558
(partial model without unconserved sides chains):
PDB file :
Tito_1P3H.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P3H-query.scw
PDB file :
Tito_Scwrl_1P3H.pdb
: