Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----MAQDIISTIGDLVKWIID-----TVNKFTKK--
2KWX Chain:A ((23-59))
SDPLAVAASIIGILHLILWILDRLFFKSIYRFFEHGL
General information:
TITO was launched using:
RESULT:
Template:
2KWX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -123 for 93 contacts (-1.3/contact) +
2D Compatibility (PS) -2631 + (NN) -641 + (LL) 0
1D Compatibility (HY) -2800 + (ID) 350
Total energy: -6545.0 ( -70.38 by residue)
QMean score : 0.421
(partial model without unconserved sides chains):
PDB file :
Tito_2KWX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KWX-query.scw
PDB file :
Tito_Scwrl_2KWX.pdb
: