Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKVLYFAEIKDILQKAQEDIVLEQALTVQQFEDLLFERYPQI---N---------NKKFQVAVNEEFVQ----KSDFIQPNDTVALIPPVSGG
3DWG Chain:C ((3-93))
VTVSIPTILRPHTGGQK-SVSA-SGDTLGAVISDLEANYSGISERLMDPSSPGKLHRFVNIYVNDEDVRFSGGLATAIADGDSVTILPAVAGG
General information:
TITO was launched using:
RESULT:
Template:
3DWG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -56962 for 500 contacts (-113.9/contact) +
2D Compatibility (PS) -8061 + (NN) -3329 + (LL) 208
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -72144.0 ( -144.29 by residue)
QMean score : 0.651
(partial model without unconserved sides chains):
PDB file :
Tito_3DWG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DWG-query.scw
PDB file :
Tito_Scwrl_3DWG.pdb
: