Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKYKIDFSKGLVPAILQDNQTKQVLMLGYMNQEAFDKTIEDGVVCFYSRSKQRLWTKGETSGHTQLVKDIHVDCDNDTILIDVIPNGPTCHTGSQSCFNTEVPFSVQTLAQTVQDSAQSNNEKSYTKYLLTEGIEKITKKYGEEAFEVVIEAIK-------------GDKKAFVSEVADELYHLFVLMHALGVDFSEIEAELARRHHKRNNFKGERQNIEQW |
2A3Q Chain:A ((28-121)) | -------------------------------------------------------------------------------------------------------EPTLEDIRRLHAEFAAERDWEQF------HQPRNLLLALVGEVGELAELFQWKSDTEPGPQAWPPKERAALQEELSDVLIYLVALAARCHVDLPQAVISK-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A3Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19765 for 486 contacts (-40.7/contact) +
2D Compatibility (PS) -8713 + (NN) -3762 + (LL) 7936
1D Compatibility (HY) -1600 + (ID) 550
Total energy: -26454.0 ( -54.43 by residue)
QMean score : 0.451
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