Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEAFLGALEFQENEYEEFKELYESLKTKQKPHTLFISCVDSRVVPNLITGTQPGELYVIRNMGNVIPPKTSYKESLSTIASVEYAIAHVGVQNLIICGHSDCGACGSIHLIHDETTKAKTPYIANWIQFLEPIKEELKNHPQFSNHFAKRSWLTERLNARLQLNNLLSYDFIQERVINNELKIFGWHYIIETGRIYNYNFESHFFEPIEETIKQRISHENF
1EKJ Chain:A ((15-214))
ERIKTGFLHFKKEKYDKNPALYGELAKGQSPPFMVFACSDSRVCPSHVLDFQPGEAFVVRNVANLVPPYDQA-KYAGTGAAIEYAVLHLKVSNIVVIGHSACGGIKGLLSFPFDGT-YSTDFIEEWVKIGLPAKAKVKAQH-GDAPFAELCTHCEKEAVNASLGNLLTYPFVREGLVNKTLALKGGYYDFVKGSFELWGLEFGLSSTFSV-----------
General information:
TITO was launched using:
RESULT:
Template:
1EKJ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113382 for 1506 contacts (-75.3/contact) +
2D Compatibility (PS) -21320 + (NN) -8545 + (LL) 1328
1D Compatibility (HY) -12800 + (ID) 3050
Total energy: -157769.0 ( -104.76 by residue)
QMean score : 0.464
(partial model without unconserved sides chains):
PDB file :
Tito_1EKJ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1EKJ-query.scw
PDB file :
Tito_Scwrl_1EKJ.pdb
: