Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQEFLGFGVVGNFAGHLEQAGESHSFINMKSEEKDAPKGLFPFYIPYEN-CYLGRCCINNHKIILPSDPDLRVQAEPEIALECDVKYDEKHLVTKLVP-------NFFMAFNDASVRNLEA-TKLSQKKNFSPASKGIGQKLPIDRFVYGGVCNNFSIASFLKYDNVWHIYGENSKLLKYEFFYQKLLDWIKNQLNHQQDGDSLEALRPFLERHNFPTKMIFAIGATPYMPFAQEHFLQKGDEVVIVAYNHLQYSFEKIQNLLEEDALQTKEHANLSYVYQIVE |
| 1GTT Chain:A ((5-195)) | -----IFAVALNHRSQLDAWQEAFQ------QSPYKAPPKTAVWFIKPRNTVIG----CGEPIPFPQ-G-EKVLSGATVALIVG----KTAT--KVREEDAAEYIAGYALANDVSLPEESFYRPAIKAKCR-DGFCPIGETVALS------NVDNLTIYTE--INGRPADHWNT---ADLQRNAAQLLSALSEF-------------------ATLNPGDAILLGTP-----QARVEIQPGDRVRVLAEGFPPLENPVVDEREVTTRKSFPTLPHPHGTLFALG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1GTT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -66300 for 1367 contacts (-48.5/contact) +
2D Compatibility (PS) -19243 + (NN) -912 + (LL) 3868
1D Compatibility (HY) -1200 + (ID) 1400
Total energy: -85187.0 ( -62.32 by residue)
QMean score : 0.283
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