Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTSLFHLKFLKPLSCLQAGLLYSLIFGVLYHFPLFAYVYK---ESNQVSFIAMIIIVLFCVNGALFLALGLISAYLMRWSAIVFSWLNSVAFYFISAYKVFLNKSMMGNVLNTNTHEVLGFLSVKLFVFIVVFGVLPGYVIYKIPLKNSSKKAPFLAILALVFIFIASAFMNAKNWLWFDKHAKFIGGLILPFAYSVNAFRVSALKFFAPTIKPLPLFSPNHSHSFVVLVIGESARKSNYALYGYEKPTTPRLSKRLENHELTLFNATSCATYTTASLECILDSSFKNSLGAYENLPTYLTKAGVKVFWYSANDGEKNVKVTSYLKNYELIQKCPNCEAIAPYDESLLYNLPNLLKERSNENILLILHLAGSHGPNYDNKVPLNFRVFKPYCSSADLSSCSKESLINAYDNTIFYNDYLLDKIISMLENAKQPALMIYLSDHGESLGEGAYYLHGIPKSIAP--KEQYEIPFILYANDLFKEKHSIIQTQTPINQNTIFHSVLGVFEDFKTPSAVYRPSLDLLKHKKE |
3ZPJ Chain:A ((1-356)) | MTTLEEINLLVERG---------------YYEEALAKVYEIEDPIEQVQVLTKIVVTIYQHDGPMEWIPSIMEDAMYIAKK----------------------------------------------------------------LRDPANKAVAYSIIASTLAIME--------------------------------YEEDAMDFFNRAIDEANEIESPIEKGMVLSTLAYHLAIAGY---------PDNALEIFNIAFDTIIGAETSYTHKVDGILRIGDLLEK----AGDTLPSNEAMDFYKMAFDIFDKLHVNQRAAIVEKKIELAKTVYDVG---------LPQIRAALLKGKNHYALAIIKKKYS----------------------------GVMRLIGELEVALWMKRVNNMEYLDVVDKAFE---------CCESPRFTDVNVQHIARLLTELGNLRRALKFAKEIQNIHKRSEALKAIALELVRRKKFEEVKKIIESI--PDPKIREEALNEIGTIE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3ZPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160918 for 2814 contacts (-57.2/contact) +
2D Compatibility (PS) -36415 + (NN) -6246 + (LL) 11880
1D Compatibility (HY) -11200 + (ID) 2850
Total energy: -205749.0 ( -73.12 by residue)
QMean score : 0.198
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