Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----MNYWTKLSIEYANQRSYL---------------DDLFQVYPTIPEGLREIDSKIWSNVEYHFKRKDNLALITELLNLDLFPIKDSYMAYLKRDKSALERNPRTINRICGRLYEMGLNKIFEKCSEPKETNRQIGPMFKDWINNKS----LGVEPVDLNDFIA---NENDAILKASDNVMAEFAKSHLNYHHHKGLDFVARFNKKYIIGEAKFLTDFGGHQNAQFNDAINTIETPNIKAIK----VAILDGVLYIESNNKMRKLLDTTYRNYHIMSALVLREFLYQI------------------------------------------------------------ |
4WID Chain:A ((10-362)) | KDMALQHAVDLLEKMLADEEKLTEFNLGDPLFESANDDPIKTLEEIIQEGDDVVGAHQLVVTQIKLRVQRNRRLADEIIREQLTDIRKVFSDKFEKLEQGIQNSYLLLDKLKTPFQDM---RCLFEVANEQFNDTPVPPQYKEFMVCLKQIVQYAVNSSSLEKFVMLITKKDDIKDRVTYTCMKYLLMAMQGTGGPKAINNEEHAKLFFQLSNYDDLTDANHDGLELIKKLDKEQKEVAFHVNNFTHLVTTLGMALYKEGHQKNDEAMLGMHTPITMLSDQVRVLILYLIDEIVHAIHTNSNQSNDELIDGLKPKVRIVINEFHATLMMGIDKMKFYSLNELREIVNDKI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WID.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7931 for 1716 contacts (-4.6/contact) +
2D Compatibility (PS) -26346 + (NN) -3949 + (LL) -76
1D Compatibility (HY) -6800 + (ID) 1700
Total energy: -46802.0 ( -27.27 by residue)
QMean score : 0.245
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