Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAEWKTDTEEVKKVVGRCREFKRSLQEEKCSPFIKDL-DSYALKIIVERRKTEMQLEKAIGELKKAKSNEDDAKVALRVLQGASVVSWIWPPARIAATAAIVAAEAVLKFMKEDTEKCKRNVELLERMLEIYSNQAKASANLMNQAWEGIKKRLHFYTDKHQEFIRRLKQASDAIDNEYNFPTPGVLLEYDFERPAISYTPKKSVFNERLKDLRENFSASLYADLKDKIHHNALSNDD-LERMIAFREQEFEKSLEDWMGAYSYDENPNDELD---RMAISKEQELEKSLEDLMPSVLGV----PSYNESLTLAKNRCVKNFKEALEGFTEKIKESPNDSNAINEAFDNLETELERATENLSQKIDPVLERNENYTQKALEYREFLESRKESFIVDEKNPYPEEVSFNEWRWAEFDSVFSAIVPLEDLNKTACAHHALKALQATLKDNDLGFDATELEQIAKGFIPRGYLWHFDANVLGNLALVREELLLGVKHTKGYSLWTEFLQKQN |
| 4XGC Chain:E ((1-458)) | MEAICSSLEPLFPC--------REAAIETLGELIGDSSETYPSAIYLFGH-----------------SGTGKTALTRAFLKECGKR----QNVRTAHLNAI---------------ECYTTKIMLEILLDSLAPDQGDALKV----------------DNMLDFVEQLRRQAAT-----RVEDQGFLIAVD---NAERLRDMDANVLPVLLRLQELTNLNLCVILLSQLPFEKFYNKTGLSEIVCLHLAQYNKAETQRILGSDFQQVRNQLLEQKKRLEICQEAVTEDFYNNYLNLFLSVFYKACRDVPELQLTARKCLSTYLEPVLDGTSRL-------------WRHIAGPLRSALTQIYMRIESL---ELPYYAKFLLIAAFLASHNAA--KQDKRLFSTTLGPKSFSIDRLLAIFYAILE----EKVGLTCNLLSQISTLVHLNLLSFVSGE-QNIMEG----------SARLQCTIGL---EFVLQIGKVVGFNV-RQYLCD-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -12520 for 2870 contacts (-4.4/contact) +
2D Compatibility (PS) -41087 + (NN) -15252 + (LL) 9324
1D Compatibility (HY) -31600 + (ID) 3650
Total energy: -94785.0 ( -33.03 by residue)
QMean score : 0.273
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