Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKIFLGM----ALAFSVSMAEKSGAFLGGGFQY-------SNLENQNTTRTPSANNNTPINTSMFGNNQAAPAQET--PSVINTNNYGQMYGVDAMAGYKWFFGKTKRFGFRTYG---YYSYNHANLSFVGSKLGIMDG---------------ASQVNNFTYGVG------------------FDALYNFY--------ESKEG----------YNTAGLFVGFGLGGDS-------------------FIVQGESY--LKSQMQICNNTAGCSASMNTSYFQMPVEFGFRSNFSKHSGIEVGFKLPLFTNQFYKERGVDGSVDVFYKRNFSI---YFNYMINL-- |
| 2DER Chain:A ((17-380)) | AKKVIVGMSGGVDSSVSAWLLQQQGYQVEGLFMKNWEEDDGEEYCTAAADLADAQAVCDKLGIELHTVNFAAEYWDNVFELFLAEYKAGRTPNPDILCNKEIKFKAFLEFAAEDLGADYIATGHYVRRADVDGKSRLLRGLDSNKDQSYFLYTLSHEQIAQSLFPVGELEKPQVRKIAEDLGLVKFREFLGRYLPAQPGKIITVDGDEIGEHQGLMYHTLGQRKGLGIGGTKEGTEEPWYVVDKDVENNILVVAQGHEHPRLMSVGLIAQQLHWVDREPFTGTMRCTVKTRYRQTDIPCTVKALDDDRIEVIFDEPVAAVTPGQSAVFYNGEVCLGGGIIEQRLPLPV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2DER.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -50241 for 1755 contacts (-28.6/contact) +
2D Compatibility (PS) -26341 + (NN) 2978 + (LL) 0
1D Compatibility (HY) -4400 + (ID) 2250
Total energy: -80254.0 ( -45.73 by residue)
QMean score : 0.144
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